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1
Place the natto in a suribachi. Work the pestle in firm, circular strokes for 3–5 minutes until the soybeans break down into a rough, cohesive paste and the characteristic strings are fully integrated. The grinding is complete when no whole or clearly intact bean remains — this transformation from whole soybean to paste is the foundation of the dish.
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2
Bring the dashi to a gentle simmer in a medium pot. Add the daikon and cook until just tender — a piece pressed between finger and thumb yields without resistance.
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3
Reduce the heat so the dashi is hot but not boiling. Add the ground natto paste and stir vigorously until it dissolves fully into the broth, producing a cloudy, uniformly thickened liquid. The broth should show no streaks or undissolved clumps.
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4
Add the tofu cubes and leek. Simmer briefly — the leek should soften at the edges while retaining a faint resistance at the centre when pressed.
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5
Remove the pot from direct heat. Dissolve the miso into the broth, stirring until fully integrated. Taste: the broth should read as rich and double-fermented — miso quantity may be reduced if natto depth is already pronounced. Add soy sauce and taste again for brightness.
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6
Ladle immediately into warmed bowls. The soup must be served very hot — at sufficient temperature the cloudy broth holds its integrated character; at low temperature the flavours separate and the preparation loses coherence. Steam rising freely from the bowl is the required condition.